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Software for Sequence Alignment Dot Plots
  • dotmatcher - Display a threshold dot plot of two sequences (part of the EMBOSS package)
  • dotpath - Display a non-overlapping wordmatch dotplot of two sequences (part of the EMBOSS package)
  • dottup - Display a wordmatch dotplot of two sequences (part of the EMBOSS package)
  • polydot - Display all-against-all dotplots of a set of sequences (part of the EMBOSS package)
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